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Students

Molecular Biophysics Training Program Appointees 
(2024-2025)

 

Nick Fisher
Nick Fisher

Kelleher Lab, 3rd year Chemistry student
Automated Native Mass Spectrometry for PROTAC Ternary Complex Proteoform Analysis

Nick’s research is focused on the development of biological mass spectrometry approaches for studying intact protein complexes and the organization of proteoforms within chromatin and organ tissues.

 

Miranda Flores Escobar

Miranda Flores Escobar

Christensen Lab, 2nd year IBiS student
Functional Role of Aps Proteins on Dynein Activation and Coordinated Nuclear Movement

 Miranda is investigating how the potential dynein adaptors—ApsA, ApsB, and ApsC—activate and regulate multiple dynein motor complexes to drive nuclear transport within Aspergillus nidulans.

 

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Irving Francisco

Vafabakhsh Lab, 2nd year IBiS student
Biophysical investigation of the nucleolus assembly

 Biophysical studies on the principles governing nucleolus assembly during mitosis.


 

Mario GarciaMario Garcia

Rocklin Lab, 3rd year DGP student

High-throughput discovery of protein energy landscapes in nanobodies

Mario is leveraging high-throughput hydrogen-deuterium exchange to uncover the determinants of protein stability and dynamics.

 

Karen GomezKaren Gomez

Ziarek Lab, 2nd year DGP student

Biophysical Approaches to Selectively Modulating NTSR1 for Substance Use Disorder

Karen aims to create a framework for engineering pharmacologically distinct GPCR ligands to explore broader mechanisms of allosteric modulation.

 

Chloe Jackson

Pinkett Lab, 3rd year IBiS student

Investigating the differential regulation of pleiotropic drug response elements in Saccharomyces cerevisiae

Chloe's research focuses on zinc cluster transcription factors that regulate the drug response in S. cerevisiae and the formation of both homodimers and heterodimers by these proteins through structural and biophysical techniques coupled with live-cell assays.

 Lydia KenneyLydia Kenney

Pinkett Lab, 2nd year IBiS student

Investigating the Roles of Accessory Domains as Regulators of Bacterial ATP-Binding Cassette (ABC) Transporters Through Biophysical and Structural Characterization

 Lydia is studying the ProU osmoregulatory ATP-binding cassette (ABC) transporter from Yersinia pestis and its cystathionine-ß-synthase (CBS) regulatory domain using structural biology and biochemistry techniques like cryo-EM, EPR spectroscopy, and transport assays. 

Shiqi Liang

Shiqi Liang

Tullman-Ercek Lab, 3rd year IBiS student

Investigating the Role of Protein and Nucleic Acid Composition and Structure on the MS2 Virus-like Particle Assembly Mechanism

Shiqi is studying the role of nucleic acid cargo and secondary structure elements of the MS2 CP in the MS2 VLP assembly using a combination of high-throughput screening and biophysical studies. 

  

Adun ObisesanAdun Obisesan

Rocklin Lab, 2nd year IBiS student

Determining design rules for miniproteins with high folding stability and low hydrophobicity

 Adun works on using high-throughput and computational approaches for designing proteins to be highly stable and active across a wide range of conditions.


Gracie Siffer

Gracie Siffer

Vafabakhsh Lab, 3rd year IBiS student

Studying Activation and Signaling Mechanisms of Adhesion GPCRs

Biophysical Study of the Activation and Signaling Mechanisms in Adhesion GPCRs using smFRET and live cell signaling assays.

 
 

Xinjue Wei

Xinjue Wei

Marko Lab, 3rd year PHY student

Study of protein effect on DNA dynamics

Xinjue's current research investigates how DNA-binding proteins, specifically GapR, interact and manipulate DNA mechanics. Using magnetic tweezers, the study focuses on GapR's role in stabilizing positively supercoiled DNA introducing supercoils, with the goal of understanding bacterial DNA dynamics.